Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs72694388 | chr1:48642943 | C/T | 0.000541 | 210 | 14.1 | 20 | 5.92 | KM Plot |
| KIRP | rs72707818 | chr15:24744883 | T/C | 6.81E-7 | 213 | 15.88 | 17.87 | 9.77 | KM Plot |
| KIRP | rs72707825 | chr15:24756345 | C/T | 7.05E-7 | 212 | 16.43 | 17.87 | 9.77 | KM Plot |
| KIRP | rs72723208 | chr9:72418133 | C/G | 0.000164 | 209 | 13.97 | 18.87 | 25.12 | KM Plot |
| KIRP | rs72726528 | chr1:89455980 | C/A | 5.58E-5 | 204 | 17.07 | 15.9 | 10 | KM Plot |
| KIRP | rs7272751 | chr20:25983284 | C/T | 9.56E-9 | 207 | 18.03 | 13.1 | 1.17 | KM Plot |
| KIRP | rs72733445 | chr15:40719442 | C/G | 9.01E-5 | 210 | 14.83 | 21.93 | 9.25 | KM Plot |
| KIRP | rs72749450 | chr1:198100275 | A/G | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
| KIRP | rs72749455 | chr1:198106890 | C/A | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
| KIRP | rs72749461 | chr1:198111913 | G/C | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
| KIRP | rs72749463 | chr1:198113395 | C/T | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
| KIRP | rs72749465 | chr1:198114364 | G/A | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
| KIRP | rs72749467 | chr1:198114618 | C/T | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
| KIRP | rs72749470 | chr1:198115445 | T/G | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
| KIRP | rs72749473 | chr1:198122036 | C/T | 1.35E-6 | 213 | 14.83 | 31.97 | 13.65 | KM Plot |